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  • Maxim Gonchar's avatar
    Squashed 'subtrees/dagflow/' changes from ac12566f7..d42b4ddc · 750ef198
    Maxim Gonchar authored
    d42b4ddc chore: rename GNIndex.values to GNIndex._indices
    a4893e0f chore: rename GNIndexInstance.instances to GNIndexInstance.indices
    d7459163 chore: GNIndex(Instance), protect kwargs of copywith
    0d1424ea fix: load_parameters index estimation
    aa62aa24c data: clean labels
    734e5a3b model: add baselines
    226ee425 feat: load_parameters, enable common formatted labels
    8c53d515d data: finalize baselines
    01573f80 model: add index for isotope
    015912a23 data: baselines, versions, readme
    12a63e32 test: add output
    fe148ffd Merge commit '8b1d453f'
    8b1d453f Squashed 'subtrees/dagflow/' changes from 95d62916b..ac12566f7
    e562885a feat: add index
    9eece309 Squashed 'subtrees/dagflow/' changes from 7213f2085..95d62916b
    d7239cfa Merge commit '9eece309'
    1818053b Squashed 'subtrees/dagflow/' changes from 1f1c32a9f..7213f2085
    99268651 Merge commit '1818053b'
    e5a1b024 chore: add gindex symlink
    49bf0aae Squashed 'subtrees/dagflow/' changes from 2d7b0a8ad..1f1c32a9f
    eefbb3aa Merge commit '49bf0aae'
    84a041ec Squashed 'subtrees/dagflow/' changes from 5ad52de74..2d7b0a8ad
    57f0dcb0 Merge commit '84a041ec'
    5de63fee Squashed 'subtrees/dagflow/' changes from daaef5c0..5ad52de7
    53e4d165 Merge commit '5de63fee'
    b3f85160 test: do not create output files
    fc038f73 Merge commit '6f45eddc'
    6f45eddc Squashed 'subtrees/dagflow/' changes from 2bd9deec..daaef5c0
    a2ed3742 feat: reorganize GaussianParameters (inherits Parameters) to GaussianConstraint (member of Parameters)
    8b8aa2aff data: labels
    a9d5514c chore: cleaning
    55dd4470 feat: dayabay_v0, test nuisance
    a59698d0 feat: add marks for Sum and SumSq
    d667e727 chore: cleaning
    22dc8426 feat: add Node._inherit_labels
    aec88088 chore: clean load_parameters from total nuisance
    f7a9ebab9 data: fix energy resolution uncertainty (to percent)
    11dba025 feat: add Graph to dayabay_v0
    083de9dc chore: variable cleaning
    033f3050 feat: Node, add labels iterator
    9a59e93e feat: NormalizeCorrelatedVars2, inherit labels
    669a52fd chore: dayabay_v0
    f1b012cb feat: load_parameters, add nuisance groups
    7aa38feb feat: Node, add `to_dict` for variable-like outputs
    7706adc5 chore: variable, remove `normvalue` from `to_dict`
    6da14e5e chore: remove obsolet links
    7201cf27 feat: parameters - add a set of normalized parameters
    b4214219 chore: update parameters location
    d0a989e2 feat: load_parameters, add individual parameters
    482d068d feat: parameters, add single Parameter and GaussianParameter
    d452b411 feat: Output.seti to set particular field of the output
    352fcb13 feat: variables, export to dictionary
    412b3246 feat: parameters printer (WIP)
    b8f445aa chore: dictwrapper→multikeydict
    a5a4baf5 Squashed 'subtrees/dagflow/' changes from 481cafd1..2bd9deec
    b31cf791 Merge commit 'a5a4baf5'
    376149bf test: fix tests
    21ccc542 Squashed 'subtrees/dagflow/' changes from 24081d59..481cafd1
    5c4f8ba6 Merge commit '21ccc542'
    addeab8f Squashed 'subtrees/dagflow/' changes from 491844d3..24081d59
    97d3a398 Merge commit 'addeab8f'
    91cc64ec Squashed 'subtrees/dagflow/' changes from ee99f9f4..491844d3
    7147e8ad Merge commit '91cc64ec'
    a0d6ee58 Squashed 'subtrees/dagflow/' changes from ba6d5690..ee99f9f4
    1086df0f Merge commit 'a0d6ee58'
    51b85750 model: nprotons
    5676f99d6 data: nprotons
    da14a0e1 Squashed 'subtrees/dagflow/' changes from e1e993a7..ba6d5690
    d1e36850 Merge commit 'da14a0e1'
    050305a9 model: storage
    cccff281d data: eres, thermal power
    cf3ba427 Squashed 'subtrees/dagflow/' changes from 964f59a0..e1e993a7
    b52629c7 Merge commit 'cf3ba427'
    ee5ed551 chore: naming
    f94b9338d data: names
    5180dd6f Squashed 'subtrees/dagflow/' changes from 60baeb4f..964f59a0
    f563d32b Merge commit '5180dd6f'
    08aeef8b model: energy per fission
    5c5a8f8b4 data: cleaning
    c880b474b data: mean energy per fission
    14b7bae9 mode: Daya Bay v1 (recent changes)
    489eb22a9 data: latex labels
    6ef8eae0 Merge branch 'main' of git.jinr.ru:dag-computing/dayabay-model
    bf89cba0 Merge commit '698b9e93'
    f3533b38 feat: dayabay, paramter paths
    698b9e93 Squashed 'subtrees/dagflow/' changes from 625ac07e..60baeb4f
    e134cffb feat: dayabay, paramter paths
    30fec8ac Merge commit '1d3d9e38'
    1d3d9e38 Squashed 'subtrees/dagflow/' changes from 0b115a36..625ac07e
    6bd149a1 Merge commit 'ee7b5a8c'
    ee7b5a8c Squashed 'subtrees/dagflow/' changes from c4b1b128..0b115a36
    30c9f99b Merge commit 'ab5c2031'
    ab5c2031 Squashed 'subtrees/dagflow/' changes from e8a89804..c4b1b128
    4f842baa chore: pprint
    c6199779 Squashed 'subtrees/dagflow/' changes from 63525278..e8a89804
    bcd60921 Merge commit 'c6199779'
    93b9709c Merge branch 'main' of git.jinr.ru:dag-computing/dayabay-model
    e758008b Squashed 'subtrees/dagflow/' changes from 5bd12830..63525278
    23c81abc Merge commit 'e758008b'
    978bcae8 fix artifacts path in the CI; adding empty conftest to fix simple run of test
    2bcece354 data: update parameters
    1b27ec23 test: conftest
    ec250717 Squashed 'subtrees/dagflow/' content from commit 5bd12830
    18c8088b Merge commit 'ec250717' as 'subtrees/dagflow'
    REVERT: ac12566f7 Merge commit 'fb39e612192594a6c6518c09a72dc781f12ab2a2' into feature/pars-gindex
    REVERT: fb39e6121 Squashed 'subtrees/gindex/' changes from 68bd0d9..45b8f39
    REVERT: 95d62916b Merge commit 'a42a2714457b64172293df1d0c674fa1b99ae0b3' into feature/pars-gindex
    REVERT: a42a27144 Squashed 'subtrees/gindex/' changes from f2cf624..68bd0d9
    REVERT: 7213f2085 Merge commit '61172e91daf352b7f7b0198efc841fc1aa94da35' into feature/pars-gindex
    REVERT: 61172e91d Squashed 'subtrees/gindex/' changes from bfee821..f2cf624
    REVERT: 1f1c32a9f chore: add gindex symlink
    REVERT: 236f54260 Squashed 'subtrees/gindex/' content from commit bfee821
    REVERT: 2d7b0a8ad Merge commit '236f54260d46f50f48b261b13579b300c42b15d7' as 'subtrees/gindex'
    REVERT: 5ad52de74 fix: fix numpy 1.23.1 as there is a conflict between numba and numpy 1.24
    REVERT: daaef5c0e chore: fix unit tests, rename variables to parameters
    REVERT: a432eff8b feat: reorganize GaussianParameters (inherits Parameters) to GaussianConstraint (member of Parameters)
    REVERT: ab2248a56 feat: add marks for Sum and SumSq
    REVERT: 8ccd52d95 chore: cleaning
    REVERT: 968754df1 feat: add Node._inherit_labels
    REVERT: 6a620a2da chore: clean load_parameters from total nuisance
    REVERT: b59644df9 chore: variable cleaning
    REVERT: fb28e9d56 feat: Node, add labels iterator
    REVERT: 4fe69f282 feat: NormalizeCorrelatedVars2, inherit labels
    REVERT: 2f438b6d2 feat: load_parameters, add nuisance groups
    REVERT: 05fd14b9b feat: Node, add `to_dict` for variable-like outputs
    REVERT: d89e86fd1 chore: variable, remove `normvalue` from `to_dict`
    REVERT: 9fd013e51 feat: parameters - add a set of normalized parameters
    REVERT: 623554677 feat: load_parameters, add individual parameters
    REVERT: 7df95ec64 feat: parameters, add single Parameter and GaussianParameter
    REVERT: 5366b87b3 feat: Output.seti to set particular field of the output
    REVERT: c0fa1348e feat: variables, export to dictionary
    REVERT: c7d647ef9 Merge commit 'a5a4baf5'
    REVERT: 2bd9deec8 chore: update dictwrapper (MultikeyDict)
    REVERT: 41834c1b3 Merge commit '157b766fa218e08ae48afdfa9bb9e5446e97cdf6' into feature/parameters-organization
    REVERT: 157b766fa Squashed 'subtrees/dictwrapper/' changes from fbb3811..31a2c74
    REVERT: a931649c1 Merge commit '21ccc542'
    REVERT: 481cafd1a feat: LoadFileWithExt logging
    REVERT: 30dcceb5a Merge commit 'addeab8f'
    REVERT: 24081d596 feat: LoadFileWithExt logging
    REVERT: c4ec8d88e Merge commit '91cc64ec'
    REVERT: 491844d3e feat: LoadFileWithExt logging
    REVERT: c5551dcb7 Merge commit 'a0d6ee58'
    REVERT: ee99f9f4a feat: LoadFileWithExt logging
    REVERT: 49d95257a chore: clean logger
    REVERT: a4c8a24bb Merge commit 'da14a0e1'
    REVERT: ba6d5690b chore: load_parameter, improve validation
    REVERT: 0870742d2 Merge commit 'cf3ba427'
    REVERT: 84dbde76d Squashed 'subtrees/dictwrapper/' changes from a3ea5a2..fbb3811
    REVERT: e1e993a76 Merge commit '84dbde76ddc81fa5145a01bd07fb81b9904f076a' into feature/parameters-organization
    REVERT: d15ea2b0c Merge commit '5180dd6f'
    REVERT: 964f59a07 chore: variable → parameter
    REVERT: 8d32759fc feat: load_variables, support lists
    REVERT: 1bdb5f93f Merge commit '698b9e93'
    REVERT: 60baeb4f1 feat: load_variables, accept also contextlib.Path
    REVERT: 8020c549e Merge commit '1d3d9e38'
    REVERT: 625ac07e5 feat: LoadFileWithExt, optionally update the dictionary
    REVERT: 8db818385 feat: load_variables, configure sub path
    REVERT: c957a88f0 Merge commit 'ee7b5a8c'
    REVERT: 0b115a369 feat: LoadFileWithExt, optionally update the dictionary
    REVERT: 8b7c82865 Merge commit 'ab5c2031'
    REVERT: c4b1b1285 feat: LoadFileWithExt, optionally update the dictionary
    REVERT: b829d99ba Merge commit 'c6199779'
    REVERT: 290035839 chore: Parameters, properly treat kwargs
    REVERT: e8a898040 feat: load_variables, configure sub path
    REVERT: a2af35113 feat: bundle load_variable `state` option
    REVERT: a39073df6 feat: Parameter/GaussianParameter, `__slots__`, `free`/`constrained`/`fixed`/`variable`/`correlated` properties
    REVERT: d7974b2af feat: load_variables, enable loading the files
    REVERT: 7646352f9 feat: more schema modules
    REVERT: e874df2c1 feat: graphviz add mid-nodes to handle single output to multiple inputs connection
    REVERT: 80f2c3d0c update conftest.py
    REVERT: 432ce4de2 Merge commit 'e758008b'
    REVERT: 63525278a feat: bundle load_variable `state` option
    REVERT: b6dc9a47f feat: Parameter/GaussianParameter, `__slots__`, `free`/`constrained`/`fixed`/`variable`/`correlated` properties
    REVERT: 289b18f28 feat: load_variables, enable loading the files
    REVERT: 4b237e30a feat: more schema modules
    REVERT: 249aa720a feat: graphviz add mid-nodes to handle single output to multiple inputs connection
    REVERT: d356a1177 Merge commit 'ec250717' as 'subtrees/dagflow'
    REVERT: 06e5de799 omit subtrees from coverage report
    REVERT: 5bd12830e feat: load_variables, enable loading the files
    REVERT: 7ace3d4ff feat: more schema modules
    REVERT: 5932df691 feat: graphviz add mid-nodes to handle single output to multiple inputs connection
    REVERT: f3d467271 Merge branch 'fix/issue-32' into 'master'
    REVERT: 33e593695 remove Node.logger creation
    REVERT: fa882cee9 [issue: #32] fix extra logger creation
    REVERT: ab319f3da Merge branch 'feature/parameters-organization' into 'master'
    REVERT: d59e5e0f7 Squashed 'subtrees/dictwrapper/' changes from 0a60e21..a3ea5a2
    REVERT: ceab5329c Merge commit 'd59e5e0f715744779a1f870ed4fe5cabe57b45b4' into feature/parameters-organization
    REVERT: d62b87065 chore: fix issues from !22
    REVERT: f79da2c70 chore: fix errors (unit tests)
    REVERT: 5178d6bc2 feat: load_variables bundle
    REVERT: 77bcffceb chore: dagflow.tools → dagflow.iter
    REVERT: 9888c5b94 feat: tools.schema.NestedSchema to work with nested configurations
    REVERT: b7fc24568 Merge branch 'master' into feature/parameters-organization
    REVERT: df4285d43 fix: NormalizeCorrelatedVars2, setup agreement on how to update when sigma/central are modified
    REVERT: ca8596ba8 chore: graphviz do not add empty status bar
    REVERT: 5e123aa23 draft: variables, initialize nodes
    REVERT: 340f730f1 feat: graphviz, print ninputs
    REVERT: 5967d6003 chore: remove `undefined`
    REVERT: 9a88d0fa8 feat: Node._label: str → dict
    REVERT: ac2e758e3 draft: variables, finalize labels validation
    REVERT: 86aef7a4d Merge branch 'feature/data-descriptor' into 'master'
    REVERT: 5efa314ef keep only Tuple[EdgesLike]
    REVERT: d2bcba7a3 redesign DataDescriptor
    REVERT: ffa2161c9 draft: variables cfg reading
    REVERT: 90ac89928 draft: complete schema for variables
    REVERT: a0869b0ee [issue: #31] Adding DataDiscriptor field into Input and Output and update other sources and tests
    REVERT: 0a2c2d837 [issue: #31] design DataDescriptor and Axis classes, adding new types
    REVERT: d01d7f301 draft: start drafting the loader for variables
    REVERT: 956a8b5a5 requirements: add schema
    REVERT: 176be49d9 Merge branch 'feature/new-nodes' into 'master'
    REVERT: b2beb86d7 test: check_inputs_square_or_diag (SumMatOrDiag)
    REVERT: 555b74535 fix: check_inputs_square_or_diag
    REVERT: bc99c12da Merge branch 'feature/new-nodes' into 'master'
    REVERT: ea251af49 chore: cleaning for !19
    REVERT: bb5afe83f subtree: link
    REVERT: b74169ffc Squashed 'subtrees/dictwrapper/' changes from 16e0834..0a60e21
    REVERT: 0d43f410e Merge commit 'b74169ffc0a88d1723fa7b7ace28a193b39eddab' into feature/parameters-organization
    REVERT: ee612f7ef Merge branch 'feature/new-nodes' into feature/parameters-organization
    REVERT: c4c45bc01 feat: SumMatOrDiag node
    REVERT: b06c59042 chore: switch to cacheing njit
    REVERT: e2b54777a feat: graphviz, better data handling during exceptions
    REVERT: c56a3271a feat: check_inputs_square_or_diag
    REVERT: bd3a1dd76 chore: cleaning
    REVERT: 697fd9d66 chore: NormalizeCorrelatedVars2, avoid outdated values
    REVERT: 97087e9f0 feat: ElSumSq - elementwise sum of squares
    REVERT: aee3d5d8a feat: check_inputs_same_dtype
    REVERT: 4fde39fb5 feat: SumSq node
    REVERT: 8b2071023 test: Sum
    REVERT: 871016fac chore: cleaning
    REVERT: 0948884ce chore: Sum/Product, check equivalence
    REVERT: b15055fbe feat: input.get_data_unsafe
    REVERT: 2684661bf feat: typfunctions, handle for AllPositionals
    REVERT: 996146bf0 Merge branch 'feature/parameters-norm' into 'master'
    REVERT: b1f5cb85c chore: revert non-mutable arguments
    REVERT: 5ee7ceb1f chore: cleaning
    REVERT: 083c20026 Add dictwrapper as a subtree
    REVERT: f6a491e52 Squashed 'subtrees/dictwrapper/' content from commit 16e0834
    REVERT: 675e04a81 Merge commit 'f6a491e5262e3f957fb1a2b01dcbada5d98843c3' as 'subtrees/dictwrapper'
    REVERT: f448816b8 fix: test for variable
    REVERT: ef67b7d8b feat: variable, add 'cor' mode (sigma, correlation as inputs)
    REVERT: 29bb594ab fix: Node, fix positional/keyword
    REVERT: 9a0562700 feat: finalize GaussianParameter
    REVERT: a2c477196 feat: node CovmatrixFromCormatrix
    REVERT: 7257e2b68 test: NormalizeCorrelatedVars2, check immediate computation
    REVERT: 2bccd70ed feat: graphviz data justification
    REVERT: ea570878e deprecate: SharedInputsNode
    REVERT: 6ab0ad347 test: NormalizeCorrelatedVars2
    REVERT: 37382a16d fix: minor
    REVERT: 4eaa8de37 fix: unit test
    REVERT: 2573160ef Merge branch 'master' into feature/parameters-norm
    REVERT: 6bdb6d66d chore: check_has_input→check_has_inputs
    REVERT: 1e2160fb2 chore: check_has_input→check_has_inputs
    REVERT: ce05077f7 chore: fix SharedInputNode
    REVERT: f2a29aae2 Merge branch 'master' into feature/parameters-norm
    REVERT: 6044ee5c3 feat: NormalizeCorrelatedVars2 to provide correlated:left_right_arrow:normalized conversion (two way)
    REVERT: 6fbc10f6a chore: clean taint propagation
    REVERT: 95e245593 feat: graphviz, status information
    REVERT: 7de1277ec Merge branch 'feature/integrator-backup' into 'master'
    REVERT: 005725f68 fix of mode arg
    REVERT: 4f8c2ce9c adding 3x3 test
    REVERT: 51fb39ed8 split `orders` onto `ordersX` and `ordersY`, introduce `mode` of integration, improving checks, some redesign of Integrator
    REVERT: 38d9b62c1 chore: graphviz view
    REVERT: fc1299d12 test: more tests on graph closure
    REVERT: 57af167ba test: variables
    REVERT: 5c97fca1a feat: variable, finalize 2way correlated:left_right_arrow:uncorrelated variables calculation (draft)
    REVERT: 19de98de4 feat: graphviz add show_data_summary flag
    REVERT: 030e45c70 feat: Node.close() add `together` argument to process co-dependent nodes
    REVERT: 8afa00f7c update requirements.txt
    REVERT: a3c3a94ae adding integrator tests and comments; improving integrator; renaming and redesigning check_has_inputs -> check_has_input to keep common code style
    REVERT: d641270ae Merge branch 'master' into feature/parameters-norm
    REVERT: 20e712955 fix: make node iterate all the inputs on recursive operations, improve logging
    REVERT: 1c91957f7 fix missing_input_handler calling with zero outputs, adding check_has_input type-function, remove binning reduction, fix tests
    REVERT: 5e3352882 feat: graphviz, add option to show data
    REVERT: 966032138 test: Array's graph
    REVERT: dc77fccc3 fix: Output reallocation, protect from None
    REVERT: 3ecf89b20 fixing integrator algorithms: right output dimensions, works with integration into one bin; fixing and imporoving type function; fix and improve test
    REVERT: 7f911c1ff simplify buffer allocation
    REVERT: a26417a75 upgrade checks in Integrator, update type function
    REVERT: fcbae0e01 adding type hints and docstrings
    REVERT: b6a12769c implement 2d integration within Numba
    REVERT: 8c68d00b9 adding 2d integration, update test
    REVERT: de46a4dcf some fixes in Integrator and start work on 2d version
    REVERT: 6f58a61fb [issue: #29] implement the `Integrator` node using `numpy.trapz` and add the test; change data getter in `Output`: remove `touch` from unsafe getter and move it to the ordinary getter; change output data getter in `Input`: if the `Node` is being evaluated, trigger deep evaluation, else get the data directly; adding new type function; small fixes
    REVERT: 55034e134 Merge branch 'master' into feature/parameters-norm
    REVERT: cdf7597ef Merge branch 'feature/shared-input-taint' into 'master'
    REVERT: 5da3b1190 chore: imports
    REVERT: e3c1104c7 chore: fix unit tests
    REVERT: 5d58386d4 test: GaussianParameters
    REVERT: 785b02829 feat: show exceptions in graphviz plots
    REVERT: e1b09ce4e feat: mark for Cholesky
    REVERT: 5f58b9c01 feat: custom marks for Array
    REVERT: 1a98ade40 feature: add Parameters/GaussianParameters classes (draft)
    REVERT: 76e2cf6ef chore: clean tests
    REVERT: 5d6393420 chore: marks
    REVERT: aff1b29ef feature: node/graphviz add short mark for the node type
    REVERT: c0664e57f feat: close Array, if it owns the buffer
    REVERT: 4a98d680d chore: compatibility with Python <3.10 (strict zip)
    REVERT: 69adecee6 chore: style
    REVERT: 6260cd918 test: NormalizeCorrelatedVars
    REVERT: c3eea094c feat: complete NormalizeCorrelatedVars, forward and backward
    REVERT: 1ae2638ec feat: typefunctions, add `check_inputs_multiplicable_mat`
    REVERT: f214d9cd3 test: test Cholesky with different dtypes
    REVERT: 181fa22a3 feat: Cholesky, support 1d inputs (diagonal)
    REVERT: 160253bb9 feat: graphviz, information on outputs and inputs
    REVERT: e36ba5ec4 feat: typefunction to check squareness (or diagonals)
    REVERT: 3ef78fb7f chore: remove obsolete `EdgeContainer.__dir__`
    REVERT: d5e53cc9b test: Cholesky
    REVERT: 539cc9587 feat: `check_input_square` type function
    REVERT: 5ebff3323 fix: MissingInput formatting
    REVERT: 3406915c6 feat: add Cholesky decomposition
    REVERT: 90caae05d draft: Cholesky/NormalizeCorrelatedVars nodes
    REVERT: e4d732493 feat: clever inputs/outputs enumeration (hide '_00')
    REVERT: 19d07dfef Merge branch 'master' into feature/shared-input-taint
    REVERT: a6b1525b9 Merge branch 'feature/scalable-typefunctions' into 'master'
    REVERT: d13afb17c chore: use f-strings in `Edges`
    REVERT: 3465b6703 Merge branch 'feature/scalable-typefunctions' into feature/shared-input-taint
    REVERT: 420dbf2f6 chore: update the usage of typefunctions
    REVERT: 11e956e95 feat: make typefunctions scalable
    REVERT: f4c787725 feat: add `Edge.iter` and `Edge.iter_data`
    REVERT: db81ba2cc feat: add `Edges.iter_data()`
    REVERT: 018e98c2a chore: Merge `SettableOutput`→`Output`, `VariableArray`→`Array`
    REVERT: 3a423dda5 feat: SharedInput, taint parents
    REVERT: 291d5631e chore: rename `Node.post_allocate()` to `Node._post_allocate()`
    REVERT: 9720977b0 chore: clean VariableOutput
    REVERT: cdbf2e432 feat: Array, add 'store_weak' - reallocatable storage in Array
    REVERT: 4d20332c0 feat: SharedInputNode, keep the list of callers
    REVERT: 153ceeb64 feat: add caller argument four `Node.touch()`, add `Node._on_touch()` hook
    REVERT: 27218f9b8 test: SharedInputNode
    REVERT: 3454f708e test: SharedInputNode
    REVERT: fda7e0f9b Merge branch 'feature/type-functions-update' into 'master'
    REVERT: 4c3612691 fix input dimension and type checks
    REVERT: 5efab1d0b adding new type-function with dtype and shape checking for all the inputs
    REVERT: 559997523 adding checks of input dimension and dtype
    REVERT: f0b5d05a4 rename one check and fix annotations
    REVERT: a2dfda6ee update TODO.md
    REVERT: 209d578da [issue: #28] move type functions into a separate file and update the lib
    REVERT: ef76a8d8e update TODO
    REVERT: 41e056b72 Merge branch 'updates' into 'master'
    REVERT: 912e27817 fix: MR !12
    REVERT: cd334caf4 fix: MR !12
    REVERT: f7bce2b52 chore: Output, keep data continuity during reallocation
    REVERT: ea82aa5fa chore: cleaning
    REVERT: 72392fc64 chore: test all View combinations
    REVERT: 50b6cad70 chore: clean Views
    REVERT: 5d5aa444a chore: graphviz, survive disconnected graphs
    REVERT: 5e33fc183 chore: rename `owns_data` to `owns_buffer`
    REVERT: e9c7d4d77 chore: update View to catch reallocations
    REVERT: a037ff5e6 feat: Output._forbid_reallocation: bool to handle allocating inputs
    REVERT: 8196ab946 feat: View, catch connections to allocating inputs
    REVERT: b8508f5f9 test: extend unit tests for View/SharedInputsNode
    REVERT: 570ed6bbb feature: Node.get_data() to return 0th data if no arguments are passed
    REVERT: c42492e0b chore: graphviz, dpi, enumeration
    REVERT: 4b032f90d chore: Graph, rerize exceptions (context)
    REVERT: 9be9d4dfc chore: Edges, len/index methods
    REVERT: 17124e4aa chore: add coverage.json to .gitignore
    REVERT: 5e665a57b fix: fix unit tests on older Python
    REVERT: 0ef5bf10c chore: clean View
    REVERT: b611f9968 feature: add View transformation
    REVERT: fbad37590 chore: cleaning
    REVERT: ac0ec8edc Merge branch 'updates' into parameters
    REVERT: e7e49a7c5 chore: clean SharedInputNode
    REVERT: a42fe76aa feature: ViewConcat node, foces inputs to be allocated in the same continuous buffer
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